fliC
Some transcripts interact with the RNA untranslated regions:
fliC.5UTR,
fliC.EST3UTR
Summary:
| Name | ID | Genomic annotation | Chromosome | Strand |
|---|---|---|---|---|
| fliC | EG10321 | CDS | chr | - |
Library breakdown:
| Library | # of unique Interactions | # of chimeric fragments | Fraction as 2nd | SIC score | Longest U-tract |
|---|---|---|---|---|---|
| Exp. Phase (Melamed et al. 2016) | 10 | 9042 | 0.10 | 0.00 | 5 |
| Stat. Phase (Melamed et al. 2016) | 4 | 203 | 0.00 | -0.25 | 5 |
| Iron Limitation (Melamed et al. 2016) | 17 | 12434 | 0.18 | 0.12 | 5 |
Interaction table:
| Name | Genomic annotation | Exponential Phase | Stationary Phase | Iron Limitation |
|---|---|---|---|---|
| G0-10699 | ncRNA | — | — | Show interaction |
| arcZ | sRNA | — | — | Show interaction |
| cyaR | sRNA | Show interaction | Show interaction | Show interaction |
| fliC.fliA.IGR | IGR | Show interaction | Show interaction | Show interaction |
| glpK | CDS | — | — | Show interaction |
| mgrR | sRNA | Show interaction | Show interaction | Show interaction |
| motA.5UTR | 5UTR | Show interaction | Show interaction | Show interaction |
| nlpE.EST3UTR | 3UTR | Show interaction | — | Show interaction |
| omrB | sRNA | — | — | Show interaction |
| ryhB | sRNA | — | — | Show interaction |
| tdcG | CDS | Show interaction | — | Show interaction |
| uhpT | CDS | Show interaction | — | Show interaction |
| uhpT.EST3UTR | 3UTR | Show interaction | — | Show interaction |
| ybiJ.EST3UTR | 3UTR | Show interaction | — | Show interaction |
| ybiJ.ybiC.IGR | IGR | — | — | Show interaction |
| ykgH.EST3UTR | 3UTR | Show interaction | — | Show interaction |
| yqiB | CDS | — | — | Show interaction |