Summary:
| Experiment name | Library name | Growth condition | Number of unique transcripts | Number of interactions |
|---|---|---|---|---|
| Melamed et al. 2016 | Iron Limitation | LB + Dipyridyl | 1278 | 1874 |
Chimeric fragments genomic annotation distribution:
The fraction of chimeric fragments that each genomic annotation of RNAs was in the first/second position in the chimera.
A heatmap showing the abundance of chimeric fragments between every two RNA genomic annotations. Genomic annotations in the rows and columns represent the the position as first and second position in the chimera accordingly.
A bar plot presenting the composition of sRNA in terms of their chimeric fragment fraction out of all sRNAs chimeric fragments.
Putative sRNAs:
PCA plot showing the separation of known sRNAs (colored in red) and other RNAs (Non-sRNAs/unknown as sRNAs; colored black). The PCA is computed on the features used in Bar et al. 2021, to predict sRNAs from RIL-seq networks.
The loadings of the features in the first two components in the PCA.