RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fliC - uhpT.EST3UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
fliC uhpT.EST3UTR CDS 3UTR chr - 2003477 2003677 chr - 3845730 3845775 1091 3.7
fliC uhpT.EST3UTR CDS 3UTR chr - 2003177 2003375 chr - 3845731 3845761 170 1.7

fliC reads

uhpT.EST3UTR reads