RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fliC - fliC.fliA.IGR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
fliC fliC.fliA.IGR CDS IGR chr - 2003180 2003373 chr - 2001912 2001962 66 24.4
fliC fliC.fliA.IGR CDS IGR chr - 2003492 2003677 chr - 2001911 2001963 29 4.7

fliC reads

fliC.fliA.IGR reads