glpT
Some transcripts interact with the RNA untranslated regions:
glpT.5UTR
Summary:
| Name | ID | Genomic annotation | Chromosome | Strand |
|---|---|---|---|---|
| glpT | EG10401 | CDS | chr | - |
Library breakdown:
| Library | # of unique Interactions | # of chimeric fragments | Fraction as 2nd | SIC score | Longest U-tract |
|---|---|---|---|---|---|
| Exp. Phase (Melamed et al. 2016) | 4 | 1148 | 0.25 | 0.00 | 5 |
| Stat. Phase (Melamed et al. 2016) | 6 | 1855 | 0.17 | 0.00 | 5 |
| Iron Limitation (Melamed et al. 2016) | 4 | 1181 | 0.25 | 0.00 | 5 |
Interaction table:
| Name | Genomic annotation | Exponential Phase | Stationary Phase | Iron Limitation |
|---|---|---|---|---|
| arcZ | sRNA | Show interaction | Show interaction | Show interaction |
| arrS | cASt | — | Show interaction | — |
| cpxP.3UTR | 3UTR | Show interaction | Show interaction | Show interaction |
| cyaR | sRNA | Show interaction | Show interaction | Show interaction |
| mgrR | sRNA | — | Show interaction | — |
| sdsR | sRNA | — | Show interaction | — |
| uhpT.EST3UTR | 3UTR | Show interaction | — | Show interaction |