RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

glpT.5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
glpT.5UTR EG10401.5UTR 5UTR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 28 0.00 -1.00 5
Iron Limitation (Melamed et al. 2016) 2 437 0.00 -0.50 5

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
arcZ sRNA Show interaction
oxyS sRNA Show interaction
ryhB sRNA Show interaction