RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

raiA

Summary:

Name ID Genomic annotation Chromosome Strand
raiA EG11151 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 9 4252 0.67 0.56 7
Stat. Phase (Melamed et al. 2016) 22 1537 0.91 0.86 7
Iron Limitation (Melamed et al. 2016) 6 3102 0.83 0.67 7

Interaction table: