RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

raiA - cheY interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
raiA cheY CDS CDS chr + 2737190 2737374 chr - 1967190 1967509 16 8.5
cheY raiA CDS CDS chr - 1967001 1967458 chr + 2737206 2737375 46 8.8

raiA reads

cheY reads