ompA
Some transcripts interact with the RNA untranslated regions:
ompA.5UTR
Summary:
| Name | ID | Genomic annotation | Chromosome | Strand |
|---|---|---|---|---|
| ompA | EG10669 | CDS | chr | - |
Library breakdown:
| Library | # of unique Interactions | # of chimeric fragments | Fraction as 2nd | SIC score | Longest U-tract |
|---|---|---|---|---|---|
| Exp. Phase (Melamed et al. 2016) | 3 | 152 | 0.00 | -0.33 | 4 |
| Stat. Phase (Melamed et al. 2016) | 6 | 1084 | 0.00 | -0.17 | 4 |
| Iron Limitation (Melamed et al. 2016) | 4 | 1040 | 0.00 | -0.25 | 4 |
Interaction table:
| Name | Genomic annotation | Exponential Phase | Stationary Phase | Iron Limitation |
|---|---|---|---|---|
| arcZ | sRNA | — | Show interaction | — |
| cyaR | sRNA | Show interaction | Show interaction | Show interaction |
| gcvB | sRNA | — | — | Show interaction |
| gsk | CDS | — | — | Show interaction |
| malG.3UTR | 3UTR | Show interaction | — | — |
| micA | sRNA | — | Show interaction | — |
| rybB | sRNA | — | Show interaction | — |
| tdcG | CDS | Show interaction | Show interaction | Show interaction |
| yehA.EST3UTR | 3UTR | — | Show interaction | — |