RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

cstA.5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
cstA.5UTR EG10167.5UTR 5UTR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 2 143 0.00 -0.50 3
Stat. Phase (Melamed et al. 2016) 4 3584 0.25 0.00 5
Iron Limitation (Melamed et al. 2016) 2 691 0.50 0.00 5

Interaction table: