ytfK
Some transcripts interact with the RNA untranslated regions:
ytfK.5UTR
Summary:
| Name | ID | Genomic annotation | Chromosome | Strand |
|---|---|---|---|---|
| ytfK | G7872 | CDS | chr | + |
Library breakdown:
| Library | # of unique Interactions | # of chimeric fragments | Fraction as 2nd | SIC score | Longest U-tract |
|---|---|---|---|---|---|
| Exp. Phase (Melamed et al. 2016) | 4 | 10601 | 0.50 | 0.25 | 4 |
| Stat. Phase (Melamed et al. 2016) | 6 | 7616 | 0.50 | 0.33 | 4 |
| Iron Limitation (Melamed et al. 2016) | 4 | 4337 | 0.75 | 0.50 | 4 |
Interaction table:
| Name | Genomic annotation | Exponential Phase | Stationary Phase | Iron Limitation |
|---|---|---|---|---|
| ahpF | CDS | Show interaction | Show interaction | Show interaction |
| cspI.ydfP.IGR | IGR | — | Show interaction | — |
| fnrS | sRNA | Show interaction | Show interaction | Show interaction |
| mgrR | sRNA | Show interaction | Show interaction | Show interaction |
| trmJ | CDS | Show interaction | Show interaction | Show interaction |
| uhpT | CDS | — | Show interaction | — |