ahpF
Some transcripts interact with the RNA untranslated regions:
ahpF.EST3UTR
Summary:
| Name | ID | Genomic annotation | Chromosome | Strand |
|---|---|---|---|---|
| ahpF | EG11385 | CDS | chr | + |
Library breakdown:
| Library | # of unique Interactions | # of chimeric fragments | Fraction as 2nd | SIC score | Longest U-tract |
|---|---|---|---|---|---|
| Exp. Phase (Melamed et al. 2016) | 2 | 574 | 1.00 | 0.50 | 6 |
| Stat. Phase (Melamed et al. 2016) | 3 | 516 | 1.00 | 0.67 | 6 |
| Iron Limitation (Melamed et al. 2016) | 3 | 204 | 1.00 | 0.67 | 6 |
Interaction table:
| Name | Genomic annotation | Exponential Phase | Stationary Phase | Iron Limitation |
|---|---|---|---|---|
| fnrS | sRNA | Show interaction | Show interaction | Show interaction |
| iscR | CDS | — | Show interaction | — |
| slyB | CDS | — | — | Show interaction |
| ytfK | CDS | Show interaction | Show interaction | Show interaction |