RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

slyB

Summary:

Name ID Genomic annotation Chromosome Strand
slyB G6881 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 189 0.00 -1.00 3
Stat. Phase (Melamed et al. 2016) 1 348 1.00 0.00 3
Iron Limitation (Melamed et al. 2016) 2 294 0.00 -0.50 5

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
ahpF CDS Show interaction
cyaR sRNA Show interaction Show interaction Show interaction