RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

tpx

Summary:

Name ID Genomic annotation Chromosome Strand
tpx G6660 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Stat. Phase (Melamed et al. 2016) 1 47 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 3 82 0.33 0.00 4

Interaction table:

Name Genomic annotation Stationary Phase Iron Limitation
arcZ sRNA Show interaction
gcvB sRNA Show interaction
ryhB sRNA Show interaction
uhpT.EST3UTR 3UTR Show interaction