sucD
Some transcripts interact with the RNA untranslated regions:
sucD.EST3UTR
Summary:
| Name | ID | Genomic annotation | Chromosome | Strand |
|---|---|---|---|---|
| sucD | EG10982 | CDS | chr | + |
Library breakdown:
| Library | # of unique Interactions | # of chimeric fragments | Fraction as 2nd | SIC score | Longest U-tract |
|---|---|---|---|---|---|
| Exp. Phase (Melamed et al. 2016) | 1 | 91 | 1.00 | 0.00 | 4 |
| Stat. Phase (Melamed et al. 2016) | 8 | 803 | 0.88 | 0.75 | 6 |
| Iron Limitation (Melamed et al. 2016) | 3 | 291 | 0.67 | 0.33 | 6 |
Interaction table:
| Name | Genomic annotation | Exponential Phase | Stationary Phase | Iron Limitation |
|---|---|---|---|---|
| ackA | CDS | — | Show interaction | Show interaction |
| arcZ | sRNA | Show interaction | Show interaction | Show interaction |
| fdoG | CDS | — | Show interaction | — |
| katG | CDS | — | Show interaction | — |
| katG.5UTR | 5UTR | — | Show interaction | — |
| mnmA | CDS | — | Show interaction | — |
| pepA.5UTR | 5UTR | — | Show interaction | Show interaction |
| tolC | CDS | — | Show interaction | — |
| yghD.yghF.IGR | IGR | — | Show interaction | — |