cstA
Some transcripts interact with the RNA untranslated regions:
cstA.5UTR
Summary:
| Name | ID | Genomic annotation | Chromosome | Strand |
|---|---|---|---|---|
| cstA | EG10167 | CDS | chr | + |
Library breakdown:
| Library | # of unique Interactions | # of chimeric fragments | Fraction as 2nd | SIC score | Longest U-tract |
|---|---|---|---|---|---|
| Exp. Phase (Melamed et al. 2016) | 1 | 78 | 0.00 | -1.00 | 3 |
| Stat. Phase (Melamed et al. 2016) | 4 | 871 | 0.25 | 0.00 | 3 |
| Iron Limitation (Melamed et al. 2016) | 2 | 158 | 0.00 | -0.50 | 3 |
Interaction table:
| Name | Genomic annotation | Exponential Phase | Stationary Phase | Iron Limitation |
|---|---|---|---|---|
| cyaR | sRNA | Show interaction | Show interaction | Show interaction |
| gcvB | sRNA | — | Show interaction | — |
| minE.ycgI.IGR | IGR | — | Show interaction | — |
| omrB | sRNA | — | Show interaction | Show interaction |