RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

gatY

Summary:

Name ID Genomic annotation Chromosome Strand
gatY EG12419 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 1558 1.00 0.00 4
Stat. Phase (Melamed et al. 2016) 2 796 0.50 0.00 4
Iron Limitation (Melamed et al. 2016) 1 1579 1.00 0.00 5

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
aceK CDS Show interaction
gcvB sRNA Show interaction Show interaction Show interaction