RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gatY - gcvB interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB gatY sRNA CDS chr + 2942693 2942860 chr - 2177081 2177211 832 2.4
gatY gcvB CDS sRNA chr - 2177179 2177234 chr + 2942716 2942878 595 4.0
gatY gcvB CDS sRNA chr - 2177083 2177178 chr + 2942716 2942777 131 2.2

gatY reads

gcvB reads