RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

lrhA

Summary:

Name ID Genomic annotation Chromosome Strand
lrhA EG12123 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 2 56 0.00 -0.50 4
Stat. Phase (Melamed et al. 2016) 1 13 0.00 -1.00 6
Iron Limitation (Melamed et al. 2016) 2 126 0.00 -0.50 6

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
malG.3UTR 3UTR Show interaction
mcaS sRNA Show interaction Show interaction
uhpT CDS Show interaction Show interaction