ompX
Some transcripts interact with the RNA untranslated regions:
ompX.5UTR
Summary:
| Name | ID | Genomic annotation | Chromosome | Strand |
|---|---|---|---|---|
| ompX | EG12117 | CDS | chr | + |
Library breakdown:
| Library | # of unique Interactions | # of chimeric fragments | Fraction as 2nd | SIC score | Longest U-tract |
|---|---|---|---|---|---|
| Exp. Phase (Melamed et al. 2016) | 1 | 2017 | 0.00 | -1.00 | 5 |
| Stat. Phase (Melamed et al. 2016) | 1 | 5632 | 0.00 | -1.00 | 5 |
| Iron Limitation (Melamed et al. 2016) | 3 | 3734 | 0.33 | 0.00 | 5 |
Interaction table:
| Name | Genomic annotation | Exponential Phase | Stationary Phase | Iron Limitation |
|---|---|---|---|---|
| cyaR | sRNA | Show interaction | Show interaction | Show interaction |
| micA | sRNA | — | — | Show interaction |
| ykgH.EST3UTR | 3UTR | — | — | Show interaction |