RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ompX - cyaR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompX cyaR CDS sRNA chr + 850401 850875 chr + 2167059 2167202 5553 8.2
ompX cyaR CDS sRNA chr + 850881 851374 chr + 2167155 2167200 79 2.4

ompX reads

cyaR reads