RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

wbbH

Summary:

Name ID Genomic annotation Chromosome Strand
wbbH EG11982 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 43 0.00 -1.00 5
Stat. Phase (Melamed et al. 2016) 2 101 0.00 -0.50 6
Iron Limitation (Melamed et al. 2016) 2 193 0.00 -0.50 5

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
cyaR sRNA Show interaction Show interaction Show interaction
mgrR sRNA Show interaction
ryhB sRNA Show interaction