RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

galU

Summary:

Name ID Genomic annotation Chromosome Strand
galU EG11319 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 14 0.00 -1.00 3
Iron Limitation (Melamed et al. 2016) 2 59 0.00 -0.50 4

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
ryhB sRNA Show interaction
uhpT CDS Show interaction
uhpT.EST3UTR 3UTR Show interaction