focA
Some transcripts interact with the RNA untranslated regions:
focA.5UTR
Summary:
| Name | ID | Genomic annotation | Chromosome | Strand |
|---|---|---|---|---|
| focA | EG11258 | CDS | chr | - |
Library breakdown:
| Library | # of unique Interactions | # of chimeric fragments | Fraction as 2nd | SIC score | Longest U-tract |
|---|---|---|---|---|---|
| Exp. Phase (Melamed et al. 2016) | 2 | 106 | 0.00 | -0.50 | 4 |
| Stat. Phase (Melamed et al. 2016) | 3 | 100 | 0.00 | -0.33 | 5 |
| Iron Limitation (Melamed et al. 2016) | 3 | 190 | 0.00 | -0.33 | 5 |
Interaction table:
| Name | Genomic annotation | Exponential Phase | Stationary Phase | Iron Limitation |
|---|---|---|---|---|
| cpxP.3UTR | 3UTR | — | Show interaction | — |
| gadE.mdtE.IGT | IGT | — | Show interaction | — |
| mcaS | sRNA | Show interaction | — | Show interaction |
| rprA | sRNA | Show interaction | Show interaction | Show interaction |
| ybiJ.ybiC.IGR | IGR | — | — | Show interaction |