RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

serA.5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
serA.5UTR EG10944.5UTR 5UTR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 362 0.00 -1.00 6
Stat. Phase (Melamed et al. 2016) 2 159 0.50 0.00 6
Iron Limitation (Melamed et al. 2016) 1 351 0.00 -1.00 6

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
cpxP.3UTR 3UTR Show interaction
gcvB sRNA Show interaction Show interaction Show interaction