RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

serA.5UTR - gcvB interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
serA.5UTR gcvB 5UTR sRNA chr - 3058379 3058456 chr + 2942728 2942902 75 8.4
gcvB serA.5UTR sRNA 5UTR chr + 2942696 2942865 chr - 3058382 3058434 34 9.7

serA.5UTR reads

gcvB reads