RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

serA

Summary:

Name ID Genomic annotation Chromosome Strand
serA EG10944 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Stat. Phase (Melamed et al. 2016) 2 34 0.00 -0.50 4
Iron Limitation (Melamed et al. 2016) 1 172 1.00 0.00 6

Interaction table:

Name Genomic annotation Stationary Phase Iron Limitation
cpxP.3UTR 3UTR Show interaction
gcvB sRNA Show interaction
micL sRNA Show interaction