RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

rodZ

Summary:

Name ID Genomic annotation Chromosome Strand
rodZ EG10015 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Stat. Phase (Melamed et al. 2016) 2 53 0.00 -0.50 5
Iron Limitation (Melamed et al. 2016) 2 56 0.00 -0.50 3

Interaction table:

Name Genomic annotation Stationary Phase Iron Limitation
arcZ sRNA Show interaction
gcvB sRNA Show interaction
glnA.3UTR 3UTR Show interaction
micA sRNA Show interaction