RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

glcA.yghJ.IGR

Flanking gene IDs:

  • G7542
  • G7541

Summary:

Name ID Genomic annotation Chromosome Strand
glcA.yghJ.IGR G7542.G7541.IGR IGR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 50 1.00 0.00 6
Iron Limitation (Melamed et al. 2016) 1 72 0.00 -1.00 6

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
uhpT CDS Show interaction
uhpT.EST3UTR 3UTR Show interaction