RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

yfjW

Summary:

Name ID Genomic annotation Chromosome Strand
yfjW G7377 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 15 0.00 -1.00 3
Stat. Phase (Melamed et al. 2016) 2 22 0.00 -0.50 6
Iron Limitation (Melamed et al. 2016) 1 24 0.00 -1.00 5

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
cyaR sRNA Show interaction
mgrR sRNA Show interaction Show interaction Show interaction