RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

der

Summary:

Name ID Genomic annotation Chromosome Strand
der G7319 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 11 0.00 -1.00 3
Stat. Phase (Melamed et al. 2016) 1 31 0.00 -1.00 3
Iron Limitation (Melamed et al. 2016) 1 39 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
cyaR sRNA Show interaction
ryhB sRNA Show interaction
yfgJ CDS Show interaction