RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

yfdY

Summary:

Name ID Genomic annotation Chromosome Strand
yfdY G7240 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 615 0.00 -1.00 6
Stat. Phase (Melamed et al. 2016) 2 837 0.00 -0.50 6
Iron Limitation (Melamed et al. 2016) 1 346 0.00 -1.00 4

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
cpxP.3UTR 3UTR Show interaction
cyaR sRNA Show interaction Show interaction Show interaction