RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

folX

Summary:

Name ID Genomic annotation Chromosome Strand
folX G7195 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 125 1.00 0.00 3
Stat. Phase (Melamed et al. 2016) 1 17 0.00 -1.00 3
Iron Limitation (Melamed et al. 2016) 2 113 0.50 0.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
fnrS sRNA Show interaction Show interaction Show interaction
ryhB sRNA Show interaction