RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

shiA

Summary:

Name ID Genomic annotation Chromosome Strand
shiA G7067 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Stat. Phase (Melamed et al. 2016) 1 52 0.00 -1.00 6
Iron Limitation (Melamed et al. 2016) 1 28 0.00 -1.00 5

Interaction table:

Name Genomic annotation Stationary Phase Iron Limitation
cpxP.3UTR 3UTR Show interaction
ryhB sRNA Show interaction