RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

chiP.5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
chiP.5UTR G6370.5UTR 5UTR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 47374 0.00 -1.00 6
Stat. Phase (Melamed et al. 2016) 1 1658 0.00 -1.00 6
Iron Limitation (Melamed et al. 2016) 2 89559 0.00 -0.50 6

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
chiX sRNA Show interaction Show interaction Show interaction
ryhB sRNA Show interaction