RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

insI-1

Summary:

Name ID Genomic annotation Chromosome Strand
insI-1 G6131 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 55 0.00 -1.00 6
Iron Limitation (Melamed et al. 2016) 1 30 0.00 -1.00 6

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
gcvB sRNA Show interaction
ryhB sRNA Show interaction