RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

bamA

Summary:

Name ID Genomic annotation Chromosome Strand
bamA G6093 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 10 0.00 -1.00 4
Stat. Phase (Melamed et al. 2016) 3 65 0.00 -0.33 4

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase
cpxP.3UTR 3UTR Show interaction
micA sRNA Show interaction
motA.5UTR 5UTR Show interaction
sdsR sRNA Show interaction