RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

ydcH

Summary:

Name ID Genomic annotation Chromosome Strand
ydcH EG12865 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 97 0.00 -1.00 3
Stat. Phase (Melamed et al. 2016) 2 1313 0.00 -0.50 6
Iron Limitation (Melamed et al. 2016) 1 111 0.00 -1.00 6

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
cyaR sRNA Show interaction Show interaction Show interaction
sdsR sRNA Show interaction