RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

nuoL

Summary:

Name ID Genomic annotation Chromosome Strand
nuoL EG12092 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 42 0.00 -1.00 3
Stat. Phase (Melamed et al. 2016) 1 37 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 2 70 0.50 0.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
cyaR sRNA Show interaction Show interaction Show interaction
omrB sRNA Show interaction