RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

uspD

Summary:

Name ID Genomic annotation Chromosome Strand
uspD EG11877 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 14 0.00 -1.00 3
Iron Limitation (Melamed et al. 2016) 1 24 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
uhpT CDS Show interaction
uhpT.EST3UTR 3UTR Show interaction