RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

sthA

Summary:

Name ID Genomic annotation Chromosome Strand
sthA EG11428 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 21 0.00 -1.00 4
Stat. Phase (Melamed et al. 2016) 2 32 0.00 -0.50 4
Iron Limitation (Melamed et al. 2016) 1 35 0.00 -1.00 4

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arcZ sRNA Show interaction
spf sRNA Show interaction Show interaction Show interaction