RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

bax

Summary:

Name ID Genomic annotation Chromosome Strand
bax EG11360 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 10 0.00 -1.00 4
Stat. Phase (Melamed et al. 2016) 2 78 0.00 -0.50 5
Iron Limitation (Melamed et al. 2016) 1 11 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arcZ sRNA Show interaction
arrS cASt Show interaction
rprA sRNA Show interaction Show interaction