RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

trxA

Summary:

Name ID Genomic annotation Chromosome Strand
trxA EG11031 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Stat. Phase (Melamed et al. 2016) 1 31 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 1 90 0.00 -1.00 3

Interaction table:

Name Genomic annotation Stationary Phase Iron Limitation
ryhB sRNA Show interaction
sdsR sRNA Show interaction