RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

rpsG

Summary:

Name ID Genomic annotation Chromosome Strand
rpsG EG10906 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 3 180 0.00 -0.33 4
Stat. Phase (Melamed et al. 2016) 1 16 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 1 153 0.00 -1.00 4

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
dicF sRNA Show interaction
uhpT CDS Show interaction
uhpT.EST3UTR 3UTR Show interaction Show interaction Show interaction