RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

gyrA

Summary:

Name ID Genomic annotation Chromosome Strand
gyrA EG10423 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 20 0.00 -1.00 2
Stat. Phase (Melamed et al. 2016) 2 46 0.00 -0.50 2
Iron Limitation (Melamed et al. 2016) 1 59 0.00 -1.00 2

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arcZ sRNA Show interaction
omrB sRNA Show interaction Show interaction Show interaction