RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

gltA.5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
gltA.5UTR EG10402.5UTR 5UTR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 19 0.00 -1.00 4
Stat. Phase (Melamed et al. 2016) 1 13 0.00 -1.00 3
Iron Limitation (Melamed et al. 2016) 1 30 0.00 -1.00 4

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
sdsR sRNA Show interaction
spf sRNA Show interaction Show interaction