RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

glpD.yzgL.IGR

Flanking gene IDs:

  • EG10394
  • G7752

Summary:

Name ID Genomic annotation Chromosome Strand
glpD.yzgL.IGR EG10394.G7752.IGR IGR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Stat. Phase (Melamed et al. 2016) 1 23 0.00 -1.00 5
Iron Limitation (Melamed et al. 2016) 2 93 0.00 -0.50 5

Interaction table:

Name Genomic annotation Stationary Phase Iron Limitation
arcZ sRNA Show interaction
glpD CDS Show interaction
sdsR sRNA Show interaction