RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

glnH.5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
glnH.5UTR EG10386.5UTR 5UTR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 81 0.00 -1.00 6
Stat. Phase (Melamed et al. 2016) 1 708 1.00 0.00 6
Iron Limitation (Melamed et al. 2016) 1 147 1.00 0.00 6

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
mgrR sRNA Show interaction Show interaction Show interaction