RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

glnH.5UTR - mgrR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
mgrR glnH.5UTR sRNA 5UTR chr - 1622861 1622914 chr - 847986 848059 21 6.7
glnH.5UTR mgrR 5UTR sRNA chr - 847993 848167 chr - 1622817 1622884 126 16.1

glnH.5UTR reads

mgrR reads