RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

fusA.rpsG.IGT

Flanking gene IDs:

  • EG10360
  • EG10906

Summary:

Name ID Genomic annotation Chromosome Strand
fusA.rpsG.IGT EG10360.EG10906.IGT IGT chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 13 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 1 15 0.00 -1.00 4

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
uhpT CDS Show interaction
uhpT.EST3UTR 3UTR Show interaction